miRBase entry: tch-mir-20a

Stem-loop tch-mir-20a

Accession

MI0031232

Description

Tupaia chinensis tch-mir-20a precursor miRNA

Sequence

UAAAGUGCUUAUAGUGCAGGUAguguuuaguuaucuacugcauuaugagcacuuaaagu
..(((((((((((((((((.(((...........)))))))))))))))))))).....

Structure

---UA                 G   uguu 
     AAGUGCUUAUAGUGCAG UAg    u
     ||||||||||||||||| |||    a
     uucacgaguauuacguc auc    g
ugaaa                 -   uauu

Annotation confidence Not enough data

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Genome context

KB320410.1: 3473624-3473682 [+]

Clustered miRNAs

4 other miRNAs are < 10 kb from tch-mir-20a

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tch-miR-20a-5p

Accession	MIMAT0036569
Description	Tupaia chinensis tch-miR-20a-5p mature miRNA
Sequence	1 - UAAAGUGCUUAUAGUGCAGGUA - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 24314655
microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
"Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
"Virology (2014) 448:247-254