Stem-loop tch-mir-191

Accession

MI0031234

Description

Tupaia chinensis tch-mir-191 precursor miRNA

Sequence

4316517 reads, 13856.0 reads per million, 30 experiments

CAACGGAAUCCCAAAAGCAGCUguugucuccagagcauuccagCUGCGCUUGGAUUUCGUUCCC
.((((((((((.((..(((((((.(((.......)))...)))))))..))))))))))))...

Structure

--C          C  AA       --u   cu 
   AACGGAAUCC AA  GCAGCUg   ugu  c
   |||||||||| ||  |||||||   |||  c
   UUGCUUUAGG UU  CGUCgac   acg  a
CCC          -  CG       cuu   ag 

Annotation confidence High

Genome context

KB369979.1: 1119228-1119291 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-191

Mature tch-miR-191-5p

• Accession: MIMAT0036571
• Description: Tupaia chinensis tch-miR-191-5p mature miRNA
• Sequence: 1 - CAACGGAAUCCCAAAAGCAGCU - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-191-3p

• Accession: MIMAT0059093
• Description: Tupaia chinensis tch-miR-191-3p mature miRNA
• Sequence: 44 - CUGCGCUUGGAUUUCGUUCCC - 64
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254