Stem-loop tch-mir-9-2

Accession

MI0031238

Description

Tupaia chinensis tch-mir-9-2 precursor miRNA

Sequence

31818984 reads, 131822.0 reads per million, 30 experiments

UCUUUGGUUAUCUAGCUGUAUGAgugccacagagccgucAUAAAGCUAGAUAACCGAAAGU
..(((((((((((((((.(((((..((......))..))))).)))))))))))))))...

Structure

-UC               G     gu  ca 
   UUUGGUUAUCUAGCU UAUGA  gc  c
   ||||||||||||||| |||||  ||   
   AAGCCAAUAGAUCGA AUAcu  cg  a
UGA               A     gc  ag 

Annotation confidence High

Genome context

KB320802.1: 936542-936602 [+]

Mature tch-miR-9-5p

• Accession: MIMAT0036524
• Description: Tupaia chinensis tch-miR-9-5p mature miRNA
• Sequence: 1 - UCUUUGGUUAUCUAGCUGUAUGA - 23
• Evidence: experimental ; Illumina [1]

Mature tch-miR-9-3p

• Accession: MIMAT0059047
• Description: Tupaia chinensis tch-miR-9-3p mature miRNA
• Sequence: 40 - AUAAAGCUAGAUAACCGAAAGU - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254