Stem-loop tch-mir-9771k

Accession

MI0031242

Description

Tupaia chinensis tch-mir-9771k precursor miRNA

Sequence

865 reads, 3.0 reads per million, 29 experiments

AGGAAAGUCAUGAUGCAUUUUUgcguggaaaaauauagaaGAAUACAUCACGACUUUCUUGA
(((((((((.(((((.((((((..(((......)))..)))))).))))).)))))))))..

Structure

--         A     C      gc   ga 
  AGGAAAGUC UGAUG AUUUUU  gug  a
  ||||||||| ||||| ||||||  |||   
  UUCUUUCAG ACUAC UAAGaa  uau  a
AG         C     A      ga   aa 

Annotation confidence Medium

Genome context

KB369669.1: 1094442-1094503 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-9771k

Mature tch-miR-9771k-5p

• Accession: MIMAT0036578
• Description: Tupaia chinensis tch-miR-9771k-5p mature miRNA
• Sequence: 1 - AGGAAAGUCAUGAUGCAUUUUU - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-9771k-3p

• Accession: MIMAT0059100
• Description: Tupaia chinensis tch-miR-9771k-3p mature miRNA
• Sequence: 41 - GAAUACAUCACGACUUUCUUGA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254