Stem-loop tch-mir-671

Accession

MI0031243

Description

Tupaia chinensis tch-mir-671 precursor miRNA

Sequence

28794 reads, 121.0 reads per million, 30 experiments

AGGAAGCCCUGGAGGGGCUGGAGGugauggauguuuuccUCCGGUUCUCAGGGCUCCACC
.(((.((((((..(((((((((((.((.......)).))))))))))))))))))))...

Structure

--A   A      GA           u  ug 
   GGA GCCCUG  GGGGCUGGAGG ga  g
   ||| ||||||  ||||||||||| ||  a
   CCU CGGGAC  UCUUGGCCUcc uu  u
CCA   -      --           u  ug 

Annotation confidence High

Genome context

KB320710.1: 593893-593952 [+]

Mature tch-miR-671-5p

• Accession: MIMAT0036579
• Description: Tupaia chinensis tch-miR-671-5p mature miRNA
• Sequence: 1 - AGGAAGCCCUGGAGGGGCUGGAGG - 24
• Evidence: experimental ; Illumina [1]

Mature tch-miR-671-3p

• Accession: MIMAT0059101
• Description: Tupaia chinensis tch-miR-671-3p mature miRNA
• Sequence: 40 - UCCGGUUCUCAGGGCUCCACC - 60
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254