Stem-loop tch-mir-328

Accession

MI0031245

Description

Tupaia chinensis tch-mir-328 precursor miRNA

Sequence

387183 reads, 1678.0 reads per million, 30 experiments

GGGGGGCAGGAGGGGCUCAGGGaggaagccuguauagcccCUGGCCCUCUCUGCCCUUCCGU
((((((((((.(((((.((((((((...))).......)))))))))).))))))))))...

Structure

---          A     U     -------   a 
   GGGGGGCAGG GGGGC CAGGG       agg  
   |||||||||| ||||| |||||       ||| a
   CUUCCCGUCU UCCCG GUCcc       ucc  
UGC          C     -     cgauaug   g 

Annotation confidence High

Genome context

KB320919.1: 2001598-2001659 [-]

Mature tch-miR-328-5p

• Accession: MIMAT0059103
• Description: Tupaia chinensis tch-miR-328-5p mature miRNA
• Sequence: 1 - GGGGGGCAGGAGGGGCUCAGGG - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-328-3p

• Accession: MIMAT0036581
• Description: Tupaia chinensis tch-miR-328-3p mature miRNA
• Sequence: 41 - CUGGCCCUCUCUGCCCUUCCGU - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254