Stem-loop tch-mir-99b

Accession

MI0031246

Description

Tupaia chinensis tch-mir-99b precursor miRNA

Sequence

4328642 reads, 14027.0 reads per million, 30 experiments

CACCCGUAGAACCGACCUUGCGgggccuucgccgcacaCAAGCUCGUGUCUGUGGGU
.(((((((((..(((.((((.(.(((....))).)...)))).)))..)))))))))

Structure

C         AC   C    --C g   c 
 ACCCGUAGA  CGA CUUG   G ggc u
 |||||||||  ||| ||||   | |||  
 UGGGUGUCU  GCU GAAC   c ccg u
-         GU   C    aca g   c 

Annotation confidence Medium

Genome context

KB321018.1: 123097-123153 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from tch-mir-99b

Mature tch-miR-99b-5p

• Accession: MIMAT0036582
• Description: Tupaia chinensis tch-miR-99b-5p mature miRNA
• Sequence: 1 - CACCCGUAGAACCGACCUUGCG - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-99b-3p

• Accession: MIMAT0059104
• Description: Tupaia chinensis tch-miR-99b-3p mature miRNA
• Sequence: 39 - CAAGCUCGUGUCUGUGGGU - 57
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254