miRBase entry: tch-mir-25

Stem-loop tch-mir-25

Accession

MI0031256

Description

Tupaia chinensis tch-mir-25 precursor miRNA

Sequence

aggcggagacuugggcaauugcuggacgcugcccugggCAUUGCACUUGUCUCGGUCUGA
((((.(((((..(.(((((..((((........))))..))))).)..))))).))))..

Structure

--    g     uu g     ug    acg 
  aggc gagac  g gcaau  cugg   c
  |||| |||||  | |||||  ||||    
  UCUG CUCUG  C CGUUA  gguc   u
AG    G     UU A     Cg    ccg

Annotation confidence Not enough data

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Genome context

KB320709.1: 105595-105654 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-25

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tch-miR-25-3p

Accession	MIMAT0036590
Description	Tupaia chinensis tch-miR-25-3p mature miRNA
Sequence	39 - CAUUGCACUUGUCUCGGUCUGA - 60
Evidence	experimental Illumina [1]

References

PubMed ID: 24314655
microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
"Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
"Virology (2014) 448:247-254