Stem-loop tch-mir-21

Accession

MI0031258

Description

Tupaia chinensis tch-mir-21 precursor miRNA

Sequence

5643910 reads, 17863.0 reads per million, 30 experiments

UAGCUUAUCAGACUGAUGUUGAcuguugaaucucauggCAACAGCAGUCGAUGGGCUGUc
(((((((((.(((((.(((((.((((.((...))))))))))).))))))))))))))..

Structure

--         A     A     A    u  a 
  UAGCUUAUC GACUG UGUUG cugu ga  
  ||||||||| ||||| ||||| |||| || u
  GUCGGGUAG CUGAC ACAAC ggua cu  
cU         -     G     -    -  c 

Annotation confidence High

Genome context

KB320868.1: 206782-206841 [-]

Mature tch-miR-21-5p

• Accession: MIMAT0036592
• Description: Tupaia chinensis tch-miR-21-5p mature miRNA
• Sequence: 1 - UAGCUUAUCAGACUGAUGUUGA - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-21-3p

• Accession: MIMAT0059114
• Description: Tupaia chinensis tch-miR-21-3p mature miRNA
• Sequence: 39 - CAACAGCAGUCGAUGGGCUGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254