Stem-loop tch-mir-1247

Accession

MI0031260

Description

Tupaia chinensis tch-mir-1247 precursor miRNA

Sequence

4278 reads, 16.0 reads per million, 30 experiments

ACCCGUCCCGUUCGUCCCCGGAcguugcucucugcccCGGGAACGUCGAGACUGGAGC
.((.(((.((..(((.(((((..((........)).))))).))).)).))).))...

Structure

--A  C   C  UU   C     Ac  ugc 
   CC GUC CG  CGU CCCGG  gu   u
   || ||| ||  ||| |||||  ||    
   GG CAG GC  GCA GGGCc  cg   c
CGA  U   A  -U   A     -c  ucu 

Annotation confidence High

Genome context

KB321140.1: 5436290-5436347 [-]

Mature tch-miR-1247-5p

• Accession: MIMAT0036594
• Description: Tupaia chinensis tch-miR-1247-5p mature miRNA
• Sequence: 1 - ACCCGUCCCGUUCGUCCCCGGA - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-1247-3p

• Accession: MIMAT0059116
• Description: Tupaia chinensis tch-miR-1247-3p mature miRNA
• Sequence: 38 - CGGGAACGUCGAGACUGGAGC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254