miRBase entry: tch-mir-222

Stem-loop tch-mir-222

Accession

MI0031267

Description

Tupaia chinensis tch-mir-222 precursor miRNA

Sequence

cucaguagccaguguagauccugucuuuuguaaucagcAGCUACAUCUGGCUACUGGGU
(((((((((((((((((...(((...........)))...))))).)))))))))))).

Structure

-            -     auc   ucuu 
 cucaguagccag uguag   cug    u
 |||||||||||| |||||   |||    u
 GGGUCAUCGGUC ACAUC   gac    g
U            U     GAc   uaau

Annotation confidence Not enough data

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Genome context

KB362665.1: 270255-270313 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-222

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tch-miR-222-3p

Accession	MIMAT0036600
Description	Tupaia chinensis tch-miR-222-3p mature miRNA
Sequence	39 - AGCUACAUCUGGCUACUGGGU - 59
Evidence	experimental Illumina [1]

References

PubMed ID: 24314655
microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
"Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
"Virology (2014) 448:247-254