Stem-loop tch-mir-222

Accession

MI0031267

Description

Tupaia chinensis tch-mir-222 precursor miRNA

Sequence

453827 reads, 1973.0 reads per million, 30 experiments

CUCAGUAGCCAGUGUAGAUCCugucuuuuguaaucagcAGCUACAUCUGGCUACUGGGU
(((((((((((((((((...(((...........)))...))))).)))))))))))).

Structure

-            -     AUC   ucuu 
 CUCAGUAGCCAG UGUAG   Cug    u
 |||||||||||| |||||   |||    u
 GGGUCAUCGGUC ACAUC   gac    g
U            U     GAc   uaau 

Annotation confidence High

Genome context

KB362665.1: 270255-270313 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-222

Mature tch-miR-222-5p

• Accession: MIMAT0059121
• Description: Tupaia chinensis tch-miR-222-5p mature miRNA
• Sequence: 1 - CUCAGUAGCCAGUGUAGAUCC - 21
• Evidence: experimental ; Illumina [1]

Mature tch-miR-222-3p

• Accession: MIMAT0036600
• Description: Tupaia chinensis tch-miR-222-3p mature miRNA
• Sequence: 39 - AGCUACAUCUGGCUACUGGGU - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254