Stem-loop tch-mir-503

Accession

MI0031276

Description

Tupaia chinensis tch-mir-503 precursor miRNA

Sequence

1980 reads, 8.0 reads per million, 30 experiments

UAGCAGCGGUAACACUACUGcagugaggucugggcucugGAGUAUUGUUUCUGCUGCCAGG
..(((((((.((((.((((.(((...(((....)))))).)))).)))).)))))))....

Structure

--UA       U    C    G   uga   c 
    GCAGCGG AACA UACU cag   ggu u
    ||||||| |||| |||| |||   |||  
    CGUCGUC UUGU AUGA guc   ucg g
GGAC       U    U    G   ---   g 

Annotation confidence High

Genome context

KB370352.1: 2047948-2048008 [-]

Clustered miRNAs

4 other miRNAs are < 10 kb from tch-mir-503

Mature tch-miR-503-5p

• Accession: MIMAT0059125
• Description: Tupaia chinensis tch-miR-503-5p mature miRNA
• Sequence: 1 - UAGCAGCGGUAACACUACUG - 20
• Evidence: experimental ; Illumina [1]

Mature tch-miR-503-3p

• Accession: MIMAT0036607
• Description: Tupaia chinensis tch-miR-503-3p mature miRNA
• Sequence: 40 - GAGUAUUGUUUCUGCUGCCAGG - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254