Stem-loop tch-mir-376b

Accession

MI0031278

Description

Tupaia chinensis tch-mir-376b precursor miRNA

Sequence

2131 reads, 9.0 reads per million, 30 experiments

GUGGAUAUUCCUUCUAUGUUUAcgugcuuccugguuaAUCAUAGAGGAAAAUCCAUGUu
((((((.(((((.(((((.(((...(((....)))))).)))))))))).))))))...

Structure

---      A     U     U   cgu   u 
   GUGGAU UUCCU CUAUG UUA   gcu c
   |||||| ||||| ||||| |||   |||  
   UACCUA AAGGA GAUAC Aau   ugg c
uUG      A     -     U   ---   u 

Annotation confidence High

Genome context

KB321140.1: 4900972-4901030 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from tch-mir-376b

Mature tch-miR-376b-5p

• Accession: MIMAT0059127
• Description: Tupaia chinensis tch-miR-376b-5p mature miRNA
• Sequence: 1 - GUGGAUAUUCCUUCUAUGUUUA - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-376b-3p

• Accession: MIMAT0036609
• Description: Tupaia chinensis tch-miR-376b-3p mature miRNA
• Sequence: 38 - AUCAUAGAGGAAAAUCCAUGU - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254