Stem-loop tch-mir-218-2

Accession

MI0031289

Description

Tupaia chinensis tch-mir-218-2 precursor miRNA

Sequence

3430096 reads, 14559.0 reads per million, 30 experiments

UUGUGCUUGAUCUAACCAUGUgguugcgagguaugaguaAAACAUGGUUCCGUCAAGCACCaug
..(((((((((..((((((((..((((.........)))).))))))))..)))))))))....

Structure

--UU         CU        gg    gag 
    GUGCUUGAU  AACCAUGU  uugc   g
    |||||||||  ||||||||  ||||   u
    CACGAACUG  UUGGUACA  Aaug   a
guaC         CC        -A    agu 

Annotation confidence Medium

Genome context

KB321165.1: 2300959-2301022 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-218-2

Mature tch-miR-218-5p

• Accession: MIMAT0036514
• Description: Tupaia chinensis tch-miR-218-5p mature miRNA
• Sequence: 1 - UUGUGCUUGAUCUAACCAUGU - 21
• Evidence: experimental ; Illumina [1]

Mature tch-miR-218-3p

• Accession: MIMAT0059036
• Description: Tupaia chinensis tch-miR-218-3p mature miRNA
• Sequence: 40 - AAACAUGGUUCCGUCAAGCACC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254