miRBase entry: tch-mir-93

Stem-loop tch-mir-93

Accession

MI0031290

Description

Tupaia chinensis tch-mir-93 precursor miRNA

Sequence

CAAAGUGCUGUUCGUGCAGGUAGugugauuaccugaccuacugcugagcuagcacuucccga
..((((((((((((.((((.(((.((.(.....).)))))))))))))).))))))).....

Structure

---CA       -     U    G   u  g u 
     AAGUGCU GUUCG GCAG UAG gu a u
     ||||||| ||||| |||| ||| || | a
     uucacga cgagu cguc auc ca u c
agccc       u     -    -   -  g c

Annotation confidence Not enough data

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Genome context

KB320709.1: 105392-105453 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-93

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tch-miR-93-5p

Accession	MIMAT0036617
Description	Tupaia chinensis tch-miR-93-5p mature miRNA
Sequence	1 - CAAAGUGCUGUUCGUGCAGGUAG - 23
Evidence	experimental Illumina [1]

References

PubMed ID: 24314655
microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
"Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
"Virology (2014) 448:247-254