miRBase entry: tch-let-7e

Stem-loop tch-let-7e

Accession

MI0031293

Description

Tupaia chinensis tch-let-7e precursor miRNA

Sequence

UGAGGUAGGAGGUUGUAUAGUUgaggaggacacccaaggagaucacuauacggccuccuagcuuucc
.(((.((((((((((((((((.((((.(....))).......)))))))))))))))))).)))...

Structure

--U   G                U  -------  a g 
   GAG UAGGAGGUUGUAUAGU ga       gg g a
   ||| |||||||||||||||| ||       || |  
   uuc auccuccggcauauca cu       cc c c
ccu   g                -  agaggaa  - a

Annotation confidence Not enough data

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Genome context

KB321018.1: 123251-123317 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from tch-let-7e

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature tch-let-7e-5p

Accession	MIMAT0036620
Description	Tupaia chinensis tch-let-7e-5p mature miRNA
Sequence	1 - UGAGGUAGGAGGUUGUAUAGUU - 22
Evidence	experimental Illumina [1]

References

PubMed ID: 24314655
microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
"Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
"Virology (2014) 448:247-254