Stem-loop tch-let-7e

Accession

MI0031293

Description

Tupaia chinensis tch-let-7e precursor miRNA

Sequence

1198194 reads, 4908.0 reads per million, 30 experiments

UGAGGUAGGAGGUUGUAUAGUUgaggaggacacccaaggagaucaCUAUACGGCCUCCUAGCUUUCC
.(((.((((((((((((((((.((((.(....))).......)))))))))))))))))).)))...

Structure

--U   G                U  -------  a g 
   GAG UAGGAGGUUGUAUAGU ga       gg g a
   ||| |||||||||||||||| ||       || |  
   UUC AUCCUCCGGCAUAUCa cu       cc c c
CCU   G                -  agaggaa  - a 

Annotation confidence High

Genome context

KB321018.1: 123251-123317 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from tch-let-7e

Mature tch-let-7e-5p

• Accession: MIMAT0036620
• Description: Tupaia chinensis tch-let-7e-5p mature miRNA
• Sequence: 1 - UGAGGUAGGAGGUUGUAUAGUU - 22
• Evidence: experimental ; Illumina [1]

Mature tch-let-7e-3p

• Accession: MIMAT0059137
• Description: Tupaia chinensis tch-let-7e-3p mature miRNA
• Sequence: 46 - CUAUACGGCCUCCUAGCUUUCC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254