Stem-loop tch-mir-628

Accession

MI0031294

Description

Tupaia chinensis tch-mir-628 precursor miRNA

Sequence

49099 reads, 212.0 reads per million, 30 experiments

AUGCUGACAUAUUUACUAGAGGguaaaauuaauaaccuUCUAGUAAGAGUGGCAGUCGAag
..((((.(((.(((((((((((((..........))))))))))))).))).)))).....

Structure

---AU    A   A             aaaa 
     GCUG CAU UUUACUAGAGGgu    u
     |||| ||| |||||||||||||     
     UGAC GUG GAAUGAUCUucca    u
gaAGC    G   A             auaa 

Annotation confidence High

Genome context

KB362744.1: 834722-834782 [+]

Mature tch-miR-628-5p

• Accession: MIMAT0036621
• Description: Tupaia chinensis tch-miR-628-5p mature miRNA
• Sequence: 1 - AUGCUGACAUAUUUACUAGAGG - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-628-3p

• Accession: MIMAT0059138
• Description: Tupaia chinensis tch-miR-628-3p mature miRNA
• Sequence: 39 - UCUAGUAAGAGUGGCAGUCGA - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254