Stem-loop tch-mir-196a

Accession

MI0031297

Description

Tupaia chinensis tch-mir-196a precursor miRNA

Sequence

10673 reads, 37.0 reads per million, 26 experiments

UAGGUAGUUUCAUGUUGUUGGgauugaguuuugaacUCGGCAACAAGAAACUGCCUGAG
(((((((((((.((((((((((.((........)))))))))))).)))))))))))..

Structure

--           A          a  gag 
  UAGGUAGUUUC UGUUGUUGGg uu   u
  ||||||||||| |||||||||| ||    
  GUCCGUCAAAG ACAACGGCUc aa   u
GA           A          -  guu 

Annotation confidence High

Genome context

KB367542.1: 1120601-1120659 [+]

Mature tch-miR-196a-5p

• Accession: MIMAT0036623
• Description: Tupaia chinensis tch-miR-196a-5p mature miRNA
• Sequence: 1 - UAGGUAGUUUCAUGUUGUUGG - 21
• Evidence: experimental ; Illumina [1]

Mature tch-miR-196a-3p

• Accession: MIMAT0059140
• Description: Tupaia chinensis tch-miR-196a-3p mature miRNA
• Sequence: 37 - UCGGCAACAAGAAACUGCCUGAG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254