Stem-loop tch-mir-194

Accession

MI0031298

Description

Tupaia chinensis tch-mir-194 precursor miRNA

Sequence

7910 reads, 33.0 reads per million, 30 experiments

UGUAACAGCAACUCCAUGUGGAagugucugcugguuCCAGUGGGGCUGCUGUUAUCUG
.(((((((((.((((((.(((((.(.......).))))))))))).)))))))))...

Structure

--U         A      G     g gu 
   GUAACAGCA CUCCAU UGGAa u  c
   ||||||||| |||||| ||||| |  u
   UAUUGUCGU GGGGUG ACCuu g  g
GUC         C      -     g uc 

Annotation confidence High

Genome context

KB320702.1: 1746894-1746951 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from tch-mir-194

Mature tch-miR-194-5p

• Accession: MIMAT0036624
• Description: Tupaia chinensis tch-miR-194-5p mature miRNA
• Sequence: 1 - UGUAACAGCAACUCCAUGUGGA - 22
• Evidence: experimental ; Illumina [1]

Mature tch-miR-194-3p

• Accession: MIMAT0059141
• Description: Tupaia chinensis tch-miR-194-3p mature miRNA
• Sequence: 37 - CCAGUGGGGCUGCUGUUAUCUG - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24314655
   microRNA expression in hepatitis B virus infected primary treeshrew hepatocytes and the independence of intracellular miR-122 level for de novo HBV infection in culture
   "Xu G, Gao Z, He W, Ma Y, Feng X, Cai T, Lu F, Liu L, Li W"
   "Virology (2014) 448:247-254