Stem-loop bta-mir-4449

Accession

MI0031502

Description

Bos taurus bta-mir-4449 precursor miRNA

Literature search

1 open access papers mention bta-mir-4449
(1 sentences)

Sequence

11413 reads, 10.0 reads per million, 299 experiments

agcagcCCUCGGCGGCCUGGGAGGGACGGGcggcggugccCGUCCCGGGGCCGCUCGAGGCAcacugcg
.((((.((((((((((((....((((((((((....)))))))))).))))))).)))))....)))).

Structure

a    ---c     -       GGGA          g 
 gcag    CCUCG GCGGCCU    GGGACGGGcg c
 ||||    ||||| |||||||    ||||||||||  
 cguc    GGAGC CGCCGGG    CCCUGCccgu g
g    acAC     U       ---G          g 

Annotation confidence Medium

Genome context

6: 68399515-68399583 [+]

Mature bta-miR-4449-5p

• Accession: MIMAT0051064
• Description: Bos taurus bta-miR-4449-5p mature miRNA
• Sequence: 7 - CCUCGGCGGCCUGGGAGGGACGGG - 30
• Evidence: experimental ; Illumina [1]

Mature bta-miR-4449-3p

• Accession: MIMAT0036973
• Description: Bos taurus bta-miR-4449-3p mature miRNA
• Sequence: 41 - CGUCCCGGGGCCGCUCGAGGCA - 62
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24021155
   Profiling microRNA expression in bovine alveolar macrophages using RNA-seq
   "Vegh P, Foroushani AB, Magee DA, McCabe MS, Browne JA, Nalpas NC, Conlon KM, Gordon SV, Bradley DG, MacHugh DE, Lynn DJ"
   "Vet Immunol Immunopathol (2013) 155:238-244