Stem-loop bta-mir-4680

Accession

MI0031508

Description

Bos taurus bta-mir-4680 precursor miRNA

Sequence

1273 reads, 1.0 reads per million, 121 experiments

cugaauaaAGAACUCUUGCAGUCUUAGAUGUuauaaaaaauauauauaUCUGAAUUGUAAGAGUUGUUAGcacagg
(((....((.((((((((((((.((((((((((((.....)))).)))))))))))))))))))).))....))).

Structure

-   aaua  G            C        -    a 
 cug    aA AACUCUUGCAGU UUAGAUGU uaua a
 |||    || |||||||||||| |||||||| |||| a
 gac    UU UUGAGAAUGUUA AGUCUaua auau a
g   acGA  G            -        u    a 

Annotation confidence Medium

Genome context

26: 31462433-31462508 [+]

Mature bta-miR-4680-5p

• Accession: MIMAT0036979
• Description: Bos taurus bta-miR-4680-5p mature miRNA
• Sequence: 9 - AGAACUCUUGCAGUCUUAGAUGU - 31
• Evidence: experimental ; Illumina [1]

Mature bta-miR-4680-3p

• Accession: MIMAT0051069
• Description: Bos taurus bta-miR-4680-3p mature miRNA
• Sequence: 49 - UCUGAAUUGUAAGAGUUGUUAG - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24021155
   Profiling microRNA expression in bovine alveolar macrophages using RNA-seq
   "Vegh P, Foroushani AB, Magee DA, McCabe MS, Browne JA, Nalpas NC, Conlon KM, Gordon SV, Bradley DG, MacHugh DE, Lynn DJ"
   "Vet Immunol Immunopathol (2013) 155:238-244