Stem-loop tae-MIR9773

Accession

MI0031525

Description

Triticum aestivum tae-MIR9773 precursor miRNA

Sequence

1135604 reads, 7152.0 reads per million, 235 experiments

uUGUUGUUCAGAAAUAGGAAAGcagaaugaaauccagucuuagucaaauauuucauaucucuucuuauccauuuaaacauauggauuuagaguagagcauauggaucaaucuauuuauaauuauaagaaucgaaugugUUUGUUUUUAUGUUAUUUUGUGAAgaa
...((.((((((((((((((((((((......((...(((((.........(((((((((((.(((((((((........))))))...))).)))).)))))))..................)))))...)).....)))))))))...))))))).)))).))

Structure

uUG  G    -       ---         augaaa  cag     ---------gucaaauau       -    u   ---      uua 
   UU UUCA GAAAUAG   GAAAGcaga      uc   ucuua                  uucauau cucu cuu   auccau   a
   || |||| |||||||   |||||||||      ||   |||||                  ||||||| |||| |||   ||||||    
   aa AAGU UUUUAUU   UUUUUGUUU      ag   agaau                  agguaua gaga gag   uaggua   a
---  g    G       GUA         -gugua  cua     auuaauauuuaucuaacu       c    u   auu      uac 

Annotation confidence Low

Comments

This sequence was incorrectly named MIR2004 in [1].

Genome context

Unknown

Mature tae-miR9773-5p

• Accession: MIMAT0056545
• Description: Triticum aestivum tae-miR9773-5p mature miRNA
• Sequence: 2 - UGUUGUUCAGAAAUAGGAAAG - 22
• Evidence: experimental ; unknown

Mature tae-miR9773-3p

• Accession: MIMAT0036983
• Description: Triticum aestivum tae-miR9773-3p mature miRNA
• Sequence: 139 - UUUGUUUUUAUGUUAUUUUGUGAA - 162
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19499258
   Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv
   "Wei B, Cai T, Zhang R, Li A, Huo N, Li S, Gu YQ, Vogel J, Jia J, Qi Y, Mao L"
   "Funct Integr Genomics (2009) 9:499-511