Stem-loop tae-MIR9775

Accession

MI0031528

Description

Triticum aestivum tae-MIR9775 precursor miRNA

Literature search

1 open access papers mention tae-MIR9775
(1 sentences)

Sequence

106042 reads, 839.0 reads per million, 233 experiments

caucauauuaUGUGCGCAAUAAGAUUUUGCUAugcuuucaccguugauucaaccaauugACAUCAAUGUUGAUAAAGGCAUGgaaaaaucuuauuguauacaugauauggug
((((((((((((((.(((((((((((((.(((((((((((.(((((((((((....)))).))))))).)))...)))))))).))))))))))))).))))))))))))))

Structure

              C             G        ---   c       -    c 
caucauauuaUGUG GCAAUAAGAUUUU CUAugcuu   uca cguugau ucaa c
|||||||||||||| ||||||||||||| ||||||||   ||| ||||||| ||||  
gugguauaguacau uguuauucuaaaa gGUACGGA   AGU GUAACUA Aguu a
              a             a        AAU   U       C    a 

Annotation confidence Medium

Comments

This sequence was incorrectly named MIR2010 in [1].

Genome context

Unknown

Mature tae-miR9775-5p

• Accession: MIMAT0036986
• Description: Triticum aestivum tae-miR9775-5p mature miRNA
• Sequence: 11 - UGUGCGCAAUAAGAUUUUGCUA - 32
• Evidence: experimental ; Illumina [1]

Mature tae-miR9775-3p

• Accession: MIMAT0056548
• Description: Triticum aestivum tae-miR9775-3p mature miRNA
• Sequence: 60 - ACAUCAAUGUUGAUAAAGGCAUG - 82
• Evidence: experimental ; unknown

References

1. PubMed ID: 19499258
   Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv
   "Wei B, Cai T, Zhang R, Li A, Huo N, Li S, Gu YQ, Vogel J, Jia J, Qi Y, Mao L"
   "Funct Integr Genomics (2009) 9:499-511