Stem-loop tae-MIR6201

Accession

MI0031534

Description

Triticum aestivum tae-MIR6201 precursor miRNA

Literature search

1 open access papers mention tae-MIR6201
(2 sentences)

Sequence

315 reads, 2 reads per million, 102 experiments

accugaguuUGACCCUGAGGCACUCAUACCGccagcuuguuuagaaugcuagccgcaugagugccucaugcagcgguaucgccgguaugaguguuucagggucaagcuucggu
(((.(((((((((((((((((((((((((((...(((.((.......)).))).(((((((...))))))).(((....)))))))))))))))))))))))))))))).)))

Structure

   u                           ccagcuuguuuagaaugcuagcc       u 
acc gaguuUGACCCUGAGGCACUCAUACCG                       gcaugag  
||| |||||||||||||||||||||||||||                       ||||||| g
ugg uucgaacugggacuuugugaguauggc                       cguacuc  
   c                           ------------cgcuauggcga       c 

Annotation confidence Not enough data

Comments

This sequence was incorrectly named MIR2016 in [1].

Genome context

6A: 206659204-206659316 [-]

Mature tae-miR6201

• Accession: MIMAT0036992
• Description: Triticum aestivum tae-miR6201 mature miRNA
• Sequence: 10 - UGACCCUGAGGCACUCAUACCG - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19499258
   Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv
   "Wei B, Cai T, Zhang R, Li A, Huo N, Li S, Gu YQ, Vogel J, Jia J, Qi Y, Mao L"
   "Funct Integr Genomics (2009) 9:499-511