Stem-loop tae-MIR9779

Accession

MI0031535

Description

Triticum aestivum tae-MIR9779 precursor miRNA

Sequence

164349 reads, 6460.0 reads per million, 234 experiments

uugucucauuucuuaucuguguauaagaccaaugauccauauuuuuauguuguuuuaaaaguguucuUACCUAUGAUGAGUUGCGAACUguauugccuacauuguuugaacaaucugugagaagCUUAUGCAACGUCUGAGGAUgaacaa
.(((.(((((.((((..((((((((((...........(((((((((........)))))))))((((((....(((..(((.(((((((((.....))))..)))))))).))).))))))..))))))).)))..)))))))))))).

Structure

u   c     u    uc   -       accaaugauccauauuuuuauguuguuuuaaaagugu      CUAU   GA   G     --    u 
 ugu ucauu cuua  ugu guauaag                                     ucuUAC    GAU  GUU CGAAC  Ugua u
 ||| ||||| ||||  ||| |||||||                                     ||||||    |||  ||| |||||  |||| g
 aca agUAG GAGU  GCA CGUAUUC                                     agagug    cua  caa guuug  acau c
a   -     -    CU   A       -----------------------------------ga      ---u   -a   -     uu    c 

Annotation confidence Low

Comments

This sequence was incorrectly named MIR2017 in [1].

Genome context

Unknown

Mature tae-miR9779-5p

• Accession: MIMAT0056554
• Description: Triticum aestivum tae-miR9779-5p mature miRNA
• Sequence: 68 - UACCUAUGAUGAGUUGCGAACU - 89
• Evidence: experimental ; unknown

Mature tae-miR9779-3p

• Accession: MIMAT0036993
• Description: Triticum aestivum tae-miR9779-3p mature miRNA
• Sequence: 125 - CUUAUGCAACGUCUGAGGAU - 144
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19499258
   Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv
   "Wei B, Cai T, Zhang R, Li A, Huo N, Li S, Gu YQ, Vogel J, Jia J, Qi Y, Mao L"
   "Funct Integr Genomics (2009) 9:499-511