Stem-loop tae-MIR9780

Accession

MI0031536

Description

Triticum aestivum tae-MIR9780 precursor miRNA

Sequence

72 reads, 15 reads per million, 67 experiments

cgccgugguggccgaggaugcaaggcgugggggagcuggccaaggcgugcaccaccaucaucuggauCGGGUCGGCGCUGCACGCGGCg
(((((((((((((((.(((.((.((.((((((..((..((....))..)).)).))).).)))).)))...))))).).)).)))))))

Structure

       -  - -     --g   g  a  c -   -  ga  ug  c 
cgccgug gu g gccga   gau ca gg g ugg gg  gc  gc a
||||||| || | |||||   ||| || || | ||| ||  ||  ||  
gCGGCGC CG C CGGCU   Cua gu cu c acc cc  cg  cg a
       A  U G     GGG   g  -  a u   a  -a  ug  g 

Annotation confidence Not enough data

Comments

This sequence was incorrectly named MIR2019 in [1].

Genome context

Unknown

Mature tae-miR9780

• Accession: MIMAT0036994
• Description: Triticum aestivum tae-miR9780 mature miRNA
• Sequence: 68 - CGGGUCGGCGCUGCACGCGGC - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19499258
   Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv
   "Wei B, Cai T, Zhang R, Li A, Huo N, Li S, Gu YQ, Vogel J, Jia J, Qi Y, Mao L"
   "Funct Integr Genomics (2009) 9:499-511