Stem-loop tae-MIR9781

Accession

MI0031537

Description

Triticum aestivum tae-MIR9781 precursor miRNA

Sequence

5112 reads, 60.0 reads per million, 200 experiments

aauauguguuAUAUGUCAUGAAAAGUAUAuuauuagauuucuacacggauguaguuucuaaauauauauuUUUUGUCACAUAUAAUACAUAuu
((((((((((((((((.(((((((((((((..(((((...(((((....)))))..)))))..))))))))))))).))))))))))))))))

Structure

                C             ua     uuu     c 
aauauguguuAUAUGU AUGAAAAGUAUAu  uuaga   cuaca g
|||||||||||||||| |||||||||||||  |||||   |||||  
uuAUACAUAAUAUACA UGUUUUuuauaua  aaucu   gaugu g
                C             ua     -uu     a 

Annotation confidence Low

Comments

This sequence was incorrectly named MIR2021 in [1].

Genome context

4A: 168060209-168060301 [-]

Mature tae-miR9781-5p

• Accession: MIMAT0056555
• Description: Triticum aestivum tae-miR9781-5p mature miRNA
• Sequence: 11 - AUAUGUCAUGAAAAGUAUA - 29
• Evidence: experimental ; unknown

Mature tae-miR9781-3p

• Accession: MIMAT0036995
• Description: Triticum aestivum tae-miR9781-3p mature miRNA
• Sequence: 71 - UUUUGUCACAUAUAAUACAUA - 91
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19499258
   Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv
   "Wei B, Cai T, Zhang R, Li A, Huo N, Li S, Gu YQ, Vogel J, Jia J, Qi Y, Mao L"
   "Funct Integr Genomics (2009) 9:499-511