Stem-loop tae-MIR9782

Accession

MI0031539

Description

Triticum aestivum tae-MIR9782 precursor miRNA

Sequence

2688 reads, 13 reads per million, 115 experiments

agguugucaauuuuaucacccuaauauaaacuauauagcacaaaaauuauaccguuugaaaauagaacauaugaaguuuauauugguauauuuuuuguaauauuugacuuGUAUUAGGUUGGUCAAAUUGACGAccu
(((((((((((((.((((.((((((((((.....(((..(((((((.((((((((((.......))))((((((...)))))).)))))).)))))))..))).....)))))))))).)))).)))))))))))))

Structure

             u    c          acuau   gc       u      guuugaaaauagaac      a 
agguugucaauuu auca ccuaauauaa     aua  acaaaaa uauacc               auauga  
||||||||||||| |||| ||||||||||     |||  ||||||| ||||||               |||||| g
uccAGCAGUUAAA UGGU GGAUUAUGuu     uau  uguuuuu auaugg               uauauu  
             C    U          caguu   aa       u      --------------u      u 

Annotation confidence Low

Comments

This sequence was incorrectly named MIR2027 in [1].

Genome context

5D: 24902966-24903102 [-]

Mature tae-miR9782

• Accession: MIMAT0036997
• Description: Triticum aestivum tae-miR9782 mature miRNA
• Sequence: 111 - GUAUUAGGUUGGUCAAAUUGACGA - 134
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19499258
   Novel microRNAs uncovered by deep sequencing of small RNA transcriptomes in bread wheat (Triticum aestivum L.) and Brachypodium distachyon (L.) Beauv
   "Wei B, Cai T, Zhang R, Li A, Huo N, Li S, Gu YQ, Vogel J, Jia J, Qi Y, Mao L"
   "Funct Integr Genomics (2009) 9:499-511