Stem-loop ssc-mir-9785

Accession

MI0031545

Description

Sus scrofa ssc-mir-9785 precursor miRNA

Sequence

948 reads, 1.0 reads per million, 115 experiments

cucagaguucACCCUCAUCCUGGUGUCCGGCACcacuguacaaacuugCUGCCCACCUGGGUGAGAAGGAcucugugu
..((((((((...(((((((.((((...((((.((..((....)).)).)))))))).)))))))..))))))))...

Structure

-cu        ACC       U    UCC    C  cu  a 
   cagaguuc   CUCAUCC GGUG   GGCA ca  gu c
   ||||||||   ||||||| ||||   |||| ||  ||  
   gucucAGG   GAGUGGG CCAC   CCGU gu  ca a
ugu        -AA       U    ---    C  -u  a 

Annotation confidence High

Genome context

chr3: 22233412-22233489 [-]

Mature ssc-miR-9785-5p

• Accession: MIMAT0037002
• Description: Sus scrofa ssc-miR-9785-5p mature miRNA
• Sequence: 11 - ACCCUCAUCCUGGUGUCCGGCAC - 33
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-9785-3p

• Accession: MIMAT0052698
• Description: Sus scrofa ssc-miR-9785-3p mature miRNA
• Sequence: 49 - CUGCCCACCUGGGUGAGAAGGA - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100