Stem-loop ssc-mir-9800

Accession

MI0031564

Description

Sus scrofa ssc-mir-9800 precursor miRNA

Sequence

aauugguuuucagaccauugcuaagaugucuuugaaaagaauggugcaagacacuCAUUUGAUUCAGUUGGACACUgaaauaaaua
...(((((....)))))......((.((((((((((..((((((((.....))).)))))..)))))..)))))))..........

Structure

aauugguuuucagaccauugcua  a     --     aa     -   c 
                       ag ugucu  uugaa  gaaug gug a
                       || |||||  |||||  ||||| ||| a
                       UC ACAGG  GACUU  UUUAC cac g
-------------auaaauaaag  -     UU     AG     u   a 

Annotation confidence Not enough data

Genome context

chr16: 42164224-42164309 [+]

Mature ssc-miR-9800-3p

• Accession: MIMAT0037018
• Description: Sus scrofa ssc-miR-9800-3p mature miRNA
• Sequence: 56 - CAUUUGAUUCAGUUGGACACU - 76
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100