Stem-loop ssc-mir-9806-3

Accession

MI0031572

Description

Sus scrofa ssc-mir-9806-3 precursor miRNA

Sequence

ugcuuucuuuCCUCGCUGAGUAGUCUGGACCcacguguggcaggcagauacggucuggccaggagccgaggcc
.(((((..(((((.(((((.(.(((((...(((....)))....)))))..).)).))).)))))..))))).

Structure

u     cu     C   -  G -A     -GAC   c 
 gcuuu  uuCCU GCU GA U  GUCUG    Cca g
 |||||  ||||| ||| || |  |||||    |||  
 cggag  gagga cgg cu g  uagac    ggu u
c     cc     c   u  g ca     ggac   g 

Annotation confidence Not enough data

Genome context

chr9: 101340155-101340227 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from ssc-mir-9806-3

Mature ssc-miR-9806-5p

• Accession: MIMAT0037024
• Description: Sus scrofa ssc-miR-9806-5p mature miRNA
• Sequence: 11 - CCUCGCUGAGUAGUCUGGACC - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100