Stem-loop ssc-mir-9811

Accession

MI0031578

Description

Sus scrofa ssc-mir-9811 precursor miRNA

Sequence

254 reads, 1.0 reads per million, 48 experiments

cagggggacccgcgcuggaucguggaggagcgggaggacgggaccaacgugaacaacuggcacuggugcggCCGGGCGGGGGCCAGGGCugc
....((..(((((.((((.(((((..((.((.((..((((.......)))...)..)).)).))..))))))))))))))..))........

Structure

----cagg  ga     g    a     ga  a  g  ag ---   gg 
        gg  cccgc cugg ucgug  gg gc gg  g   acg  a
        ||  ||||| |||| |||||  || || ||  |   |||  c
        CC  GGGCG GGCC ggcgu  uc cg uc  c   ugc  c
cguCGGGA  GG     -    -     gg  a  g  aa aag   aa 

Annotation confidence Not enough data

Genome context

chr3: 84528167-84528258 [+]

Mature ssc-miR-9811-5p

• Accession: MIMAT0037029
• Description: Sus scrofa ssc-miR-9811-5p mature miRNA
• Sequence: 72 - CCGGGCGGGGGCCAGGGC - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100