Stem-loop ssc-mir-9842

Accession

MI0031611

Description

Sus scrofa ssc-mir-9842 precursor miRNA

Sequence

auuaggaacaUCUCAGAGAUCAGAGGAAGCCAgcacggugugaaagagcugcucugugggcuccggguuuuauuccaucg
....((((...(((.(((..(((((..(((...(((...))).....))).)))))....))).))).....))))....

Structure

auua    --caU   A   --AU     GA   --CAg   g 
    ggaa     CUC GAG    CAGAG  AGC     cac  
    ||||     ||| |||    |||||  |||     ||| g
    ccuu     ggg cuc    gucuc  ucg     gug  
gcua    auuuu   c   gggu     -g   agaaa   u 

Annotation confidence Not enough data

Genome context

chr6: 86019409-86019488 [-]

Mature ssc-miR-9842-5p

• Accession: MIMAT0037060
• Description: Sus scrofa ssc-miR-9842-5p mature miRNA
• Sequence: 11 - UCUCAGAGAUCAGAGGAAGCCA - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100