Stem-loop ssc-mir-9845-6

Accession

MI0031619

Description

Sus scrofa ssc-mir-9845-6 precursor miRNA

Sequence

cacuagggccUGAACCCAGAUCGGCCCGGGguccuuugugugcaggcacgccccccugggucucacuguggccaggccacagca
..((..((((((..(((((...(((((((((.....(((((....)))))...)))))))))...))).)).))))))..))..

Structure

ca  ag      AA  -   AUC         uccuu     g 
  cu  ggccUG  CC CAG   GGCCCGGGg     ugugu c
  ||  ||||||  || |||   |||||||||     |||||  
  ga  ccggac  gg guc   cuggguccc     gcacg a
ac  ca      -c  u   acu         --ccc     g 

Annotation confidence Not enough data

Genome context

chr17: 69661596-69661679 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ssc-mir-9845-6

Mature ssc-miR-9845-5p

• Accession: MIMAT0037063
• Description: Sus scrofa ssc-miR-9845-5p mature miRNA
• Sequence: 11 - UGAACCCAGAUCGGCCCGGG - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100