Stem-loop ssc-mir-6782

Accession

MI0031620

Description

Sus scrofa ssc-mir-6782 precursor miRNA

Sequence

24493 reads, 23.0 reads per million, 193 experiments

ccuGCGGGUGGUGUGGGGGAAGGCAggggugcggccuccagccUGACCUCUGGUCUCCCGCCCUGcugccuucgg
.(((.((((((((.((((((.(.(((((((..(((.....)))..))))))).).)))).)).)))))))).)))

Structure

c   C        U  -    A G       gc   c 
 cuG GGGUGGUG GG GGGA G CAggggu  ggc u
 ||| |||||||| || |||| | |||||||  ||| c
 ggc uccgucGU CC CCCU U GUCUCCA  ccg c
-   u        C  G    C G       GU   a 

Annotation confidence Medium

Genome context

chr6: 956763-956837 [+]

Mature ssc-miR-6782-5p

• Accession: MIMAT0052706
• Description: Sus scrofa ssc-miR-6782-5p mature miRNA
• Sequence: 4 - GCGGGUGGUGUGGGGGAAGGCA - 25
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-6782-3p

• Accession: MIMAT0037064
• Description: Sus scrofa ssc-miR-6782-3p mature miRNA
• Sequence: 44 - UGACCUCUGGUCUCCCGCCCUG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100