Stem-loop ssc-mir-9848

Accession

MI0031624

Description

Sus scrofa ssc-mir-9848 precursor miRNA

Sequence

aauguuugguagcgaacugauuccagcgcccaggucaaguucacagcggucccUGCUCGAGACGUCGGAUGUGCcccagaaacc
....(((((..(((..(((((.....((..((((....(((...)))....))))..))....)))))...))).)))))....

Structure

aaug     ua   -aa     uccag  cc    ucaa   c 
    uuugg  gcg   cugau     cg  cagg    guu  
    |||||  |||   |||||     ||  ||||    ||| a
    agacc  CGU   GGCUG     GC  GUcc    cga  
ccaa     -c   GUA     -CAGA  UC    cugg   c 

Annotation confidence Not enough data

Genome context

chr7: 58088717-58088800 [+]

Mature ssc-miR-9848-3p

• Accession: MIMAT0037067
• Description: Sus scrofa ssc-miR-9848-3p mature miRNA
• Sequence: 54 - UGCUCGAGACGUCGGAUGUGC - 74
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100