Stem-loop ssc-mir-9851

Accession

MI0031627

Description

Sus scrofa ssc-mir-9851 precursor miRNA

Literature search

1 open access papers mention ssc-mir-9851
(1 sentences)

Sequence

7510 reads, 11.0 reads per million, 158 experiments

ugagcccggCGCUGGCAGUGUUGGUGGCACUcgugugguggcagUGGCACCAGCACUGGCGGUGGcggucgcacca
...(((((.(((((.(((((((((((.((((.((......)))))).))))))))))).))))).)))..))....

Structure

-uga  --   g     G           G    c  gu 
    gc  ccg CGCUG CAGUGUUGGUG CACU gu  g
    ||  ||| ||||| ||||||||||| |||| ||   
    cg  ggc GUGGC GUCACGACCAC GUga cg  g
acca  cu   G     G           G    -  gu 

Annotation confidence High

Genome context

chr14: 138325833-138325908 [-]

Mature ssc-miR-9851-5p

• Accession: MIMAT0052707
• Description: Sus scrofa ssc-miR-9851-5p mature miRNA
• Sequence: 10 - CGCUGGCAGUGUUGGUGGCACU - 31
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-9851-3p

• Accession: MIMAT0037070
• Description: Sus scrofa ssc-miR-9851-3p mature miRNA
• Sequence: 45 - UGGCACCAGCACUGGCGGUGG - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100