Stem-loop ssc-mir-9860

Accession

MI0031638

Description

Sus scrofa ssc-mir-9860 precursor miRNA

Literature search

1 open access papers mention ssc-mir-9860
(1 sentences)

Sequence

16105 reads, 12.0 reads per million, 194 experiments

ggccuuucucUUGCCCGAGAGCUUGGACCGcgcguugcaguggggugaCGCGAGGUUCAGCCCGGGCCUccucgaaggcug
(((((((.....(((((.(.(((.(((((.((((((((......)))))))).))))))))))))))......))))))).

Structure

-       -cucUU     A A   U     G        ag 
 ggccuuu      GCCCG G GCU GGACC cgcguugc  u
 |||||||      ||||| | ||| ||||| ||||||||   
 ucggaag      CGGGC C CGA CUUGG GCGCagug  g
g       cuccUC     - -   -     A        gg 

Annotation confidence High

Genome context

chr7: 106158351-106158431 [-]

Mature ssc-miR-9860-5p

• Accession: MIMAT0037079
• Description: Sus scrofa ssc-miR-9860-5p mature miRNA
• Sequence: 11 - UUGCCCGAGAGCUUGGACCG - 30
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-9860-3p

• Accession: MIMAT0052708
• Description: Sus scrofa ssc-miR-9860-3p mature miRNA
• Sequence: 49 - CGCGAGGUUCAGCCCGGGCCU - 69
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100