Stem-loop ssc-mir-371

Accession

MI0031640

Description

Sus scrofa ssc-mir-371 precursor miRNA

Literature search

3 open access papers mention ssc-mir-371
(8 sentences)

Sequence

2508 reads, 4.0 reads per million, 75 experiments

agccugugguACUCAAACUGUGGGGGCACUUUcuggucuagggagggAAGUGCCGCCAUUUUUUGAGUGUUaccgauu
...(.((((((((((((..((((.((((((((((..........)))))))))).))))..)))))))))))).)...

Structure

agc u            CU    G          gguc 
   c gugguACUCAAA  GUGG GGCACUUUcu    u
   | ||||||||||||  |||| ||||||||||     
   g caUUGUGAGUUU  UACC CCGUGAAggg    a
uua c            UU    G          aggg 

Annotation confidence Medium

Genome context

chr6: 52738857-52738934 [+]

Mature ssc-miR-371-5p

• Accession: MIMAT0037081
• Description: Sus scrofa ssc-miR-371-5p mature miRNA
• Sequence: 11 - ACUCAAACUGUGGGGGCACUUU - 32
• Evidence: experimental ; Illumina [1]

Mature ssc-miR-371-3p

• Accession: MIMAT0052709
• Description: Sus scrofa ssc-miR-371-3p mature miRNA
• Sequence: 48 - AAGUGCCGCCAUUUUUUGAGUGUU - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100