Stem-loop ssc-mir-378b

Accession

MI0031641

Description

Sus scrofa ssc-mir-378b precursor miRNA

Literature search

20 open access papers mention ssc-mir-378b
(97 sentences)

Sequence

5 reads, 9 reads per million, 3 experiments

uugagcuacauuugcuugcguucucuaagugucuggcugaaaacgcACUGGACUUGGAGUCAGAAGUugagguuccu
..(((((.((...((((.(...((((((((.(...((.......))...).))))))))...))))))).)))))..

Structure

uu     a  uuu    g guu        g cug  ug 
  gagcu ca   gcuu c   cucuaagu u   gc  a
  ||||| ||   |||| |   |||||||| |   ||  a
  cuugg gu   UGAA G   GAGGUUCA G   cg  a
uc     a  ---    - ACU        G UCA  ca 

Annotation confidence Not enough data

Genome context

chr1: 284932187-284932263 [-]

Mature ssc-miR-378b-3p

• Accession: MIMAT0037082
• Description: Sus scrofa ssc-miR-378b-3p mature miRNA
• Sequence: 47 - ACUGGACUUGGAGUCAGAAGU - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100