Stem-loop ata-MIR393

Accession

MI0031650

Description

Aegilops tauschii ata-MIR393 precursor miRNA

Sequence

uaguggaggaUUCCAAAGGGAUCGCAUUGAUcgaucucuccgucaucggcgugcaaggucgauggauCAGUGCAAUCCCUUUGGAAUUcuccgcucg
.(((((((((((((((((((((.(((((((((...........(((((((.......)))))))))))))))).)))))))))))))))))))))..

Structure

-u                     C         gaucucuccgu       gu 
  aguggaggaUUCCAAAGGGAU GCAUUGAUc           caucggc  g
  ||||||||||||||||||||| |||||||||           |||||||  c
  ucgccucUUAAGGUUUCCCUA CGUGACuag           guagcug  a
gc                     A         -----------       ga 

Annotation confidence Not enough data

Genome context

chr2: 547638879-547638975 [+]

Mature ata-miR393-5p

• Accession: MIMAT0037096
• Description: Aegilops tauschii ata-miR393-5p mature miRNA
• Sequence: 11 - UUCCAAAGGGAUCGCAUUGAU - 31
• Evidence: experimental ; Illumina [1]

Mature ata-miR393-3p

• Accession: MIMAT0037097
• Description: Aegilops tauschii ata-miR393-3p mature miRNA
• Sequence: 68 - CAGUGCAAUCCCUUUGGAAUU - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95