Stem-loop ata-MIR5070

Accession

MI0031651

Description

Aegilops tauschii ata-MIR5070 precursor miRNA

Sequence

accuaaaggguaccuUCUGACCCUUCUUAGUUCAACcaaauaaacuaauuuuuccuaauuuaguucauucagUUGAACUAAGUAGGGUCGGAGgguacccugga
.((...((((((((((((((((((.(((((((((((..(((.((((((.((.....)).)))))).)))..))))))))))).)))))))))))))))))))).

Structure

a  uaa                  U           ca   a      u  u 
 cc   aggguaccuUCUGACCCU CUUAGUUCAAC  aau aacuaa uu u
 ||   |||||||||||||||||| |||||||||||  ||| |||||| || c
 gg   ucccauggGAGGCUGGGA GAAUCAAGUUg  uua uugauu aa c
a  ---                  U           ac   c      u  u 

Annotation confidence Not enough data

Genome context

chr5: 1380924-1381027 [+]

Mature ata-miR5070-5p

• Accession: MIMAT0037098
• Description: Aegilops tauschii ata-miR5070-5p mature miRNA
• Sequence: 16 - UCUGACCCUUCUUAGUUCAAC - 36
• Evidence: experimental ; Illumina [1]

Mature ata-miR5070-3p

• Accession: MIMAT0037099
• Description: Aegilops tauschii ata-miR5070-3p mature miRNA
• Sequence: 73 - UUGAACUAAGUAGGGUCGGAG - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95