Stem-loop ata-MIR9863a

Accession

MI0031654

Description

Aegilops tauschii ata-MIR9863a precursor miRNA

Sequence

uugucgcucaauUGUUAUGAUCUGCUUCUCAUCugaagacuaguuuauuacauauaagcauauuuuugaaaguuugagagagagaucacaagcagaucccgugcagaagggaacaucauugcuacaacuacaauaauucuuccacuucaagagccauugggccgcuaaacaagucuuuagaUGAGAAGGUAGAUCAUAAUAGCugagcgaaau
...(((((((.((((((((((((((((((((((((((((((.((((((.....))))))....(((((((.((..(((((..........((((((((((........))))...))..)))).............)))))..)))))))))(((....))).........)))))))))))))))).)))))))))))))).)))))))...

Structure

uug       a              -                aguuuauuacauauaagcauau       a  uu     ---agagaucaca    --  ---    gug 
   ucgcuca uUGUUAUGAUCUGC UUCUCAUCugaagacu                      uuuugaa gu  gagag             agca  ga   uccc   c
   ||||||| |||||||||||||| ||||||||||||||||                      ||||||| ||  |||||             ||||  ||   ||||    
   agcgagu GAUAAUACUAGAUG AAGAGUagauuucuga                      agaacuu ca  uucuu             ucgu  cu   aggg   a
uaa       C              G                ---acaaaucgccggguuaccg       -  cc     aauaacaucaaca    ua  aca    aag 

Annotation confidence Not enough data

Genome context

chr1: 68907222-68907434 [+]

Mature ata-miR9863a-5p

• Accession: MIMAT0037104
• Description: Aegilops tauschii ata-miR9863a-5p mature miRNA
• Sequence: 13 - UGUUAUGAUCUGCUUCUCAUC - 33
• Evidence: experimental ; Illumina [1]

Mature ata-miR9863a-3p

• Accession: MIMAT0037105
• Description: Aegilops tauschii ata-miR9863a-3p mature miRNA
• Sequence: 182 - UGAGAAGGUAGAUCAUAAUAGC - 203
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95