Stem-loop ata-MIR2275b

Accession

MI0031665

Description

Aegilops tauschii ata-MIR2275b precursor miRNA

Sequence

acugaaagugAGAGUUGGAGGAAAACAAACAgaucauggcuagcuaaucguggucaccgaucagCUUGUUUUCCUCCAAUAUCUCAccuucgguug
((((((.(((((((((((((((((((((.(.((((.((((((........))))))..)))).).))))))))))))))).)))))).))))))..

Structure

--      a      -               A A    -a      gcu 
  acugaa gugAGA GUUGGAGGAAAACAA C gauc  uggcua   a
  |||||| |||||| ||||||||||||||| | ||||  ||||||    
  uggcuu cACUCU UAACCUCCUUUUGUU g cuag  acuggu   a
gu      c      A               C a    cc      gcu 

Annotation confidence Not enough data

Genome context

chr3: 65654016-65654111 [-]

Mature ata-miR2275b-5p

• Accession: MIMAT0037124
• Description: Aegilops tauschii ata-miR2275b-5p mature miRNA
• Sequence: 11 - AGAGUUGGAGGAAAACAAACA - 31
• Evidence: experimental ; Illumina [1]

Mature ata-miR2275b-3p

• Accession: MIMAT0037125
• Description: Aegilops tauschii ata-miR2275b-3p mature miRNA
• Sequence: 65 - CUUGUUUUCCUCCAAUAUCUCA - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95