Stem-loop ata-MIR166b

Accession

MI0031666

Description

Aegilops tauschii ata-MIR166b precursor miRNA

Literature search

1 open access papers mention ata-MIR166b
(1 sentences)

Sequence

caugguugucgagGGGAAUGACGCCGGGUCCGAAAgagagacgcgcgcauggcgugcguguggcgcguuUCGGACCAGGCUUCAUUCCCCaugacuccau
.((((..((((.(((((((((.(((.(((((((((..(..((((((((.....))))))))..)...))))))))).))).))))))))).)))).))))

Structure

c    uu    a         C   G         -ga ag        a 
 augg  gucg gGGGAAUGA GCC GGUCCGAAA   g  acgcgcgc u
 ||||  |||| ||||||||| ||| |||||||||   |  |||||||| g
 uacc  cagu CCCCUUACU CGG CCAGGCUuu   c  ugugcgug g
-    -u    a         U   A         gcg gg        c 

Annotation confidence Not enough data

Genome context

chr5: 353695259-353695358 [-]

Mature ata-miR166b-5p

• Accession: MIMAT0037126
• Description: Aegilops tauschii ata-miR166b-5p mature miRNA
• Sequence: 14 - GGGAAUGACGCCGGGUCCGAAA - 35
• Evidence: experimental ; Illumina [1]

Mature ata-miR166b-3p

• Accession: MIMAT0037127
• Description: Aegilops tauschii ata-miR166b-3p mature miRNA
• Sequence: 70 - UCGGACCAGGCUUCAUUCCCC - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95