Stem-loop ata-MIR169b

Accession

MI0031676

Description

Aegilops tauschii ata-MIR169b precursor miRNA

Literature search

1 open access papers mention ata-MIR169b
(1 sentences)

Sequence

acaucuucgaUAGCCAAGGAUGAUUUGCCUGUGaaccucccccgggagcccagcucucgggaaccugguuccaUGGGCAAGUCAUCCUGGCUACCCaaguacc
....(((.(.((((((.((((((((((((((((((((...(((((((((...))))))))).....)))).)))))))))))))))))))))).).)))....

Structure

acau   c a      A                -    --ucc         c 
    cuu g UAGCCA GGAUGAUUUGCCUGUG aacc     cccgggagc  
    ||| | |||||| |||||||||||||||| ||||     ||||||||| c
    gaa C AUCGGU CCUACUGAACGGGUac uugg     gggcucucg  
ccau   C C      -                c    uccaa         a 

Annotation confidence Not enough data

Genome context

chr5: 446365443-446365545 [-]

Mature ata-miR169b-5p

• Accession: MIMAT0037146
• Description: Aegilops tauschii ata-miR169b-5p mature miRNA
• Sequence: 11 - UAGCCAAGGAUGAUUUGCCUGUG - 33
• Evidence: experimental ; Illumina [1]

Mature ata-miR169b-3p

• Accession: MIMAT0037147
• Description: Aegilops tauschii ata-miR169b-3p mature miRNA
• Sequence: 74 - UGGGCAAGUCAUCCUGGCUACCC - 96
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95