Stem-loop ata-MIR168

Accession

MI0031679

Description

Aegilops tauschii ata-MIR168 precursor miRNA

Sequence

cgccucgggcUCGCUUGGUGCAGAUCGGGACccucagcccgccccgacgggccggauCCCGCCUUGCACCAAGUGAAUcggagccggc
((.(((.((.(((((((((((((..(((((.((...(((((......))))).)).)))))..))))))))))))).)).))).))..

Structure

--  c   g  c             AU     C  uca     cc 
  cg cuc gg UCGCUUGGUGCAG  CGGGA cc   gcccg  c
  || ||| || |||||||||||||  ||||| ||   |||||   
  gc gag cU AGUGAACCACGUU  GCCCu gg   cgggc  c
cg  c   g  A             CC     a  --c     ag 

Annotation confidence Not enough data

Genome context

chr6: 52832588-52832675 [+]

Mature ata-miR168-5p

• Accession: MIMAT0037152
• Description: Aegilops tauschii ata-miR168-5p mature miRNA
• Sequence: 11 - UCGCUUGGUGCAGAUCGGGAC - 31
• Evidence: experimental ; Illumina [1]

Mature ata-miR168-3p

• Accession: MIMAT0037153
• Description: Aegilops tauschii ata-miR168-3p mature miRNA
• Sequence: 58 - CCCGCCUUGCACCAAGUGAAU - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95