Stem-loop ata-MIR160a

Accession

MI0031681

Description

Aegilops tauschii ata-MIR160a precursor miRNA

Sequence

caaugggauaUGCCUGGCUCCCUGUAUGCCAcucgcguagcugccaacucuccaaacccaGCGUUGGCUCUACCGCGGAUGgcgugcgaggagccaagcaugaccgucucucu
..((((..(((((.(((((((.(((((((((.((((((((..((((((.((........)).)))))).))).))))).))))))))).))))))).))))).))))......

Structure

----ca    ga     C       C         c     -   cu      u  cca 
      augg  uaUGC UGGCUCC UGUAUGCCA ucgcg uag  gccaac cu   a
      ||||  ||||| ||||||| ||||||||| ||||| |||  |||||| ||    
      ugcc  guacg accgagg gcgugcgGU GGCGC AUC  CGGUUG Ga   a
ucucuc    -a     a       a         A     C   -U      C  ccc 

Annotation confidence Not enough data

Genome context

chr5: 381892576-381892688 [-]

Mature ata-miR160a-5p

• Accession: MIMAT0037156
• Description: Aegilops tauschii ata-miR160a-5p mature miRNA
• Sequence: 11 - UGCCUGGCUCCCUGUAUGCCA - 31
• Evidence: experimental ; Illumina [1]

Mature ata-miR160a-3p

• Accession: MIMAT0037157
• Description: Aegilops tauschii ata-miR160a-3p mature miRNA
• Sequence: 61 - GCGUUGGCUCUACCGCGGAUG - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95