Stem-loop ata-MIR169i

Accession

MI0031686

Description

Aegilops tauschii ata-MIR169i precursor miRNA

Literature search

1 open access papers mention ata-MIR169i
(1 sentences)

Sequence

gcuucuucugaUAGCCAAGGAUGACUUGCCUGuggauauauagcuugaucgauugcaguuacaucucugaauguacgugaucugucacuguguacaacaGGCAGUCUCCUUGGCUAGCccgaguguc
....(((....((((((((((.((((.((((((.(.(((((((..((((.((((((.((.((((......)))))))))))).)))))))))))).))))))))))))))))))))....)))....

Structure

gcuu   cuga          U    U      g a       cu    c      a  u    cu 
    cuu    UAGCCAAGGA GACU GCCUGu g uauauag  ugau gauugc gu acau  c
    |||    |||||||||| |||| |||||| | |||||||  |||| |||||| || ||||   
    gag    AUCGGUUCCU CUGA CGGaca c auguguc  acug cuagug ca ugua  u
cugu   ccCG          -    -      a -       --    u      -  -    ag 

Annotation confidence Not enough data

Genome context

chr5: 289918356-289918482 [+]

Mature ata-miR169i-5p

• Accession: MIMAT0037166
• Description: Aegilops tauschii ata-miR169i-5p mature miRNA
• Sequence: 12 - UAGCCAAGGAUGACUUGCCUG - 32
• Evidence: experimental ; Illumina [1]

Mature ata-miR169i-3p

• Accession: MIMAT0037167
• Description: Aegilops tauschii ata-miR169i-3p mature miRNA
• Sequence: 100 - GGCAGUCUCCUUGGCUAGC - 118
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95