Stem-loop ata-MIR6201

Accession

MI0031689

Description

Aegilops tauschii ata-MIR6201 precursor miRNA

Sequence

caccggcguuUGACCCUGAGGCACUCAUACCGccggcugguuuagaaugcuagcccguaugagugccuuuagaaugcuagcgGUACGAGUGUCUCAGGGCCAAacuccgauga
((.(((.(((((.(((((((((((((.((((((.(((((((.......))))))).((((.............))))..)))))).))))))))))))).))))).))).)).

Structure

-  c   c     A             A      -----------------------c       uu 
 ca cgg guuUG CCCUGAGGCACUC UACCGc                        ggcuggu  a
 || ||| ||||| ||||||||||||| ||||||                        |||||||  g
 gu gcc caAAC GGGACUCUGUGAG AUGgcg                        ccgaucg  a
a  a   u     C             C      aucguaagauuuccgugaguaugc       ua 

Annotation confidence Not enough data

Genome context

chr6: 369820159-369820271 [+]

Mature ata-miR6201-5p

• Accession: MIMAT0037172
• Description: Aegilops tauschii ata-miR6201-5p mature miRNA
• Sequence: 11 - UGACCCUGAGGCACUCAUACCG - 32
• Evidence: experimental ; Illumina [1]

Mature ata-miR6201-3p

• Accession: MIMAT0037173
• Description: Aegilops tauschii ata-miR6201-3p mature miRNA
• Sequence: 83 - GUACGAGUGUCUCAGGGCCAA - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 23535592
   Aegilops tauschii draft genome sequence reveals a gene repertoire for wheat adaptation
   "Jia J, Zhao S, Kong X, Li Y, Zhao G, He W, Appels R, Pfeifer M, Tao Y, Zhang X, Jing R, Zhang C, Ma Y, Gao L, Gao C, Spannagl M, Mayer KF, Li D, Pan S, Zheng F, Hu Q, Xia X, Li J, Liang Q, Chen J, Wicker T, Gou C, Kuang H, He G, Luo Y, Keller B, Xia Q, Lu"
   "Nature (2013) 496:91-95